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Sometimes, Yocto will not copy the files to the deploy directory, even if you specify "-fc deploy". The reason is not known. In this case, if you want to be certain your modified Device Tree has been build and copied, you can do these steps below which rebuild the entire kernel (but will will 100% of the time).
bitbake linux-kernelrenesas -fc compile bitbake linux-kernelrenesas -fc deploy
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RRECOMMENDS_libubootenv-bin_remove_class-target = " u-boot-default-env"
Yocto can create binary images of the entire system, including partition table information.
The is done in the Renesas BSP in: meta-renesas/tree/dunfell/rz/meta-rz-common/wic
For more information about creating custom WIC images for your own board, and the .wks file syntax, please see: